PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG008060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 289aa    MW: 31544.7 Da    PI: 9.058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG008060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.83.5e-12110152754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+++N+++  Lr+++P  +      K++ a+iL  A+eY+k+L
  TRIDC4BG008060.3 110 MAERRRRKKLNDRLYALRSVVPRiS------KMDRASILGDAIEYLKEL 152
                       79*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
KVLRPLENFP ASGAQPTLFQ KRALRRNAGE EDGERRKRKA AEPDIILDDA DDDIISIDAS  60
GLNYDSEDGR GVEESGRKDG NESNANSTVT GGAAAEGSGK KKGMPAKNLM AERRRRKKLN  120
DRLYALRSVV PRISKMDRAS ILGDAIEYLK ELTQKINVLQ NELEASPSTS SLPPTPTSFR  180
PPTPTMPALP SRVKEELTSS PAQEPRVEVK LREGRVVNIR MMCSRRPGVV HSSLKALEGL  240
GLDVQQAVIS YFNDFTLDVF KAECKDGPGP QAEEIKAVLL QSAGFHPAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100118KKKGMPAKNLMAERRRRKK
2112119ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.12e-74bHLH family protein