PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG006920.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 374aa    MW: 40980.5 Da    PI: 7.616
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG006920.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.33.4e-2681175297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                       +fqr+wse+De+ +LqGl+ +   +g     d++ fy+ +++s+   +++sql+eK+rrLK+K ++  +++++g +p+  ++hd+++++l+++
  TRIDC4BG006920.3  81 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVASRVARGLDPARLAPHDRDVLHLCSR 172
                       79*******************.556878888************************************************************** PP

            DUF573  95 iWg 97 
                       +W+
  TRIDC4BG006920.3 173 LWD 175
                       **8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXARKLP IKRRSPPRPS  60
SSPSSSAGAA SSGQGQNPPF KFQRIWSESD ELRFLQGLLG CGAQGLVFPR DLNVFYDRFS  120
ESMPQPYTRS QLSEKLRRLK NKHRNVASRV ARGLDPARLA PHDRDVLHLC SRLWDPANAA  180
TSPFAAAAAP ASSSGNKRRR SNPAVVPPQT LDVPAPSGDS NSHGYNGIGS STPGATAFPD  240
ENGAEDVMYL EQESGHHLYF DDGAAFVADG NLDGITLDGI ALDQAETMAV LTGNSQNGNC  300
NVLLPRSSEH RMARAVLDVF EECLREAKAD GIVNGGNAQE SELARRWRAQ RIDELDVLSR  360
RLRLIIEDAT AAGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.12e-13GeBP family protein