PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG006920.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | GeBP | ||||||||
Protein Properties | Length: 374aa MW: 40980.5 Da PI: 7.616 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 83.3 | 3.4e-26 | 81 | 175 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +fqr+wse+De+ +LqGl+ + +g d++ fy+ +++s+ +++sql+eK+rrLK+K ++ +++++g +p+ ++hd+++++l+++ TRIDC4BG006920.3 81 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVASRVARGLDPARLAPHDRDVLHLCSR 172 79*******************.556878888************************************************************** PP DUF573 95 iWg 97 +W+ TRIDC4BG006920.3 173 LWD 175 **8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 374 aa Download sequence |
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXARKLP IKRRSPPRPS 60 SSPSSSAGAA SSGQGQNPPF KFQRIWSESD ELRFLQGLLG CGAQGLVFPR DLNVFYDRFS 120 ESMPQPYTRS QLSEKLRRLK NKHRNVASRV ARGLDPARLA PHDRDVLHLC SRLWDPANAA 180 TSPFAAAAAP ASSSGNKRRR SNPAVVPPQT LDVPAPSGDS NSHGYNGIGS STPGATAFPD 240 ENGAEDVMYL EQESGHHLYF DDGAAFVADG NLDGITLDGI ALDQAETMAV LTGNSQNGNC 300 NVLLPRSSEH RMARAVLDVF EECLREAKAD GIVNGGNAQE SELARRWRAQ RIDELDVLSR 360 RLRLIIEDAT AAGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G28040.1 | 2e-13 | GeBP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG006920.3 |