PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG006920.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GeBP | ||||||||
Protein Properties | Length: 400aa MW: 43334.4 Da PI: 6.5168 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 83.1 | 3.9e-26 | 79 | 173 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +fqr+wse+De+ +LqGl+ + +g d++ fy+ +++s+ +++sql+eK+rrLK+K ++ +++++g +p+ ++hd+++++l+++ TRIDC4BG006920.2 79 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVASRVARGLDPARLAPHDRDVLHLCSR 170 79*******************.556878888************************************************************** PP DUF573 95 iWg 97 +W+ TRIDC4BG006920.2 171 LWD 173 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXARKLPIK RRSPPRPSSS 60 PSSSAGAASS GQGQNPPFKF QRIWSESDEL RFLQGLLGCG AQGLVFPRDL NVFYDRFSES 120 MPQPYTRSQL SEKLRRLKNK HRNVASRVAR GLDPARLAPH DRDVLHLCSR LWDPANAATS 180 PFAAAAAPAS SSGNKRRRSN PAVVPPQTLD VPAPSGDSNS HGYNGIGSST PGATAFPDEN 240 GAEDVMYLEQ ESGHHLYFDD GAAFVADGNL DGITLDGIAL DQAETMAVLT DVGDNGVVAG 300 DNGVVGNDAA PQNAVNNGGN SQNGNCNVLL PRSSEHRMAR AVLDVFEECL REAKADGIVN 360 GGNAQESELA RRWRAQRIDE LDVLSRRLRL IIEDATAAGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 2e-12 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG006920.2 |