PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG004770.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 759aa MW: 82061.5 Da PI: 7.6204

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.4	4.3e-16	448	486	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.5 448 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 486 689**********************************96 PP
2	TCR	49.3	9.7e-16	533	572	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4BG004770.5 533 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 572 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 759 aa Download sequence
SSLSSPPTPG TASKRTISRS TPPPFPQSSR PRITTRTRRD QSSPRSSFGD YTENEISMED 60 GTDKNKSPTS STAVRLFACT STITRESHTM ITCSVNEGIV DPPKEPNDLP QPGRFDSGSP 120 DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL FSSDMQPQDG CQPAKENNEV 180 MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC GYLLSKLAGG ADIPDRTHPT 240 TSSQAYYHEM VVGEDKTENG QLFPEDKKTI LSEEIQDNIN EENACIPLGC KVETQQRGVR 300 RRCLVFEASG YSHRTVQKEY VGDLSFSTSK GKSSAQNHRN PGKTPSPHVF RGIGLHLNAL 360 ALTSKDKMAC QDPLATALVP SLKTEQDVHG NLLSAGGNFV HSGSGSLDLQ MDNDDCSVGG 420 FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL KLYCECFAAG VYCSEPCSCQ 480 GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE TQEDPKNTPA SARHKRGCNC 540 KKSSCLKKYC ECYQGGVGCS NNCRCETCKN TFGTRDVAVS AENEEMKQEG DQTENREQEK 600 ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS NAKPPRPCKA RSGSSSRPSK 660 ASETVQSRKT SKAGDSVFIE EMPGILREPS SPGIVKTCSP NGKRVSPPHN ALGVSPSRKG 720 GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS

Sequence ? help Back to Top

Protein Sequence Length: 759 aa Download sequence

SSLSSPPTPG TASKRTISRS TPPPFPQSSR PRITTRTRRD QSSPRSSFGD YTENEISMED  60
GTDKNKSPTS STAVRLFACT STITRESHTM ITCSVNEGIV DPPKEPNDLP QPGRFDSGSP  120
DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL FSSDMQPQDG CQPAKENNEV  180
MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC GYLLSKLAGG ADIPDRTHPT  240
TSSQAYYHEM VVGEDKTENG QLFPEDKKTI LSEEIQDNIN EENACIPLGC KVETQQRGVR  300
RRCLVFEASG YSHRTVQKEY VGDLSFSTSK GKSSAQNHRN PGKTPSPHVF RGIGLHLNAL  360
ALTSKDKMAC QDPLATALVP SLKTEQDVHG NLLSAGGNFV HSGSGSLDLQ MDNDDCSVGG  420
FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL KLYCECFAAG VYCSEPCSCQ  480
GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE TQEDPKNTPA SARHKRGCNC  540
KKSSCLKKYC ECYQGGVGCS NNCRCETCKN TFGTRDVAVS AENEEMKQEG DQTENREQEK  600
ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS NAKPPRPCKA RSGSSSRPSK  660
ASETVQSRKT SKAGDSVFIE EMPGILREPS SPGIVKTCSP NGKRVSPPHN ALGVSPSRKG  720
GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	435	441	PKKRRKS
2	436	440	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-79	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.5