PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4BG004770.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 779aa MW: 83950.6 Da PI: 6.9587

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4BG004770.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.4	4.4e-16	468	506	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4BG004770.1 468 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 506 689**********************************96 PP
2	TCR	49.3	1e-15	553	592	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4BG004770.1 553 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 592 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
AAAARAEDSP LFGFIDSLSP IEPLKSAYSG NGLQAYHQSL NAASVSSIFT SPHHNAHKEG 60 SKLSKSSFGD YTENEISMED GTDKNKSPTS STAVRLFACT STITRESHTM ITCSVNEGIV 120 DPPKEPNDLP QPGRFDSGSP DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL 180 FSSDMQPQDG CQPAKENNEV MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC 240 GYLLSKLAGG ADIPDRTHPT TSSQAYYHEM VVGEDKTENG QLFPEDKKTI LSEEIQDNIN 300 EENACIPLGC KVETQQRGVR RRCLVFEASG YSHRTVQKEY VGDLSFSTSK GKSSAQNHRN 360 PGKTPSPHVF RGIGLHLNAL ALTSKDKMAC QDPLATALVP SLKTEQDVHG NLLSAGGNFV 420 HSGSGSLDLQ MDNDDCSVGG FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL 480 KLYCECFAAG VYCSEPCSCQ GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE 540 TQEDPKNTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS NNCRCETCKN TFGTRDVAVS 600 AENEEMKQEG DQTENREQEK ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS 660 NAKPPRPCKA RSGSSSRPSK ASETVQSRKT SKAGDSVFIE EMPGILREPS SPGIVKTCSP 720 NGKRVSPPHN ALGVSPSRKG GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

AAAARAEDSP LFGFIDSLSP IEPLKSAYSG NGLQAYHQSL NAASVSSIFT SPHHNAHKEG  60
SKLSKSSFGD YTENEISMED GTDKNKSPTS STAVRLFACT STITRESHTM ITCSVNEGIV  120
DPPKEPNDLP QPGRFDSGSP DHNTAPCHGV SVRSDLKQDK CPKLEAVQAT NNTVEKRKCL  180
FSSDMQPQDG CQPAKENNEV MGCEWEDLVS VTSGELLAFD SSMDQHHTGV QLAVNNAESC  240
GYLLSKLAGG ADIPDRTHPT TSSQAYYHEM VVGEDKTENG QLFPEDKKTI LSEEIQDNIN  300
EENACIPLGC KVETQQRGVR RRCLVFEASG YSHRTVQKEY VGDLSFSTSK GKSSAQNHRN  360
PGKTPSPHVF RGIGLHLNAL ALTSKDKMAC QDPLATALVP SLKTEQDVHG NLLSAGGNFV  420
HSGSGSLDLQ MDNDDCSVGG FLGNDHNSSQ SSSPPKKRRK SDNGDDDSCK RCSCKKSKCL  480
KLYCECFAAG VYCSEPCSCQ GCLNKPIHEE IVLSTRKQIE FRNPLAFAPK VIRMSEAGQE  540
TQEDPKNTPA SARHKRGCNC KKSSCLKKYC ECYQGGVGCS NNCRCETCKN TFGTRDVAVS  600
AENEEMKQEG DQTENREQEK ENDQQKANVH SEDHKLVELV VPITPPLDVS SCLLKQPNFS  660
NAKPPRPCKA RSGSSSRPSK ASETVQSRKT SKAGDSVFIE EMPGILREPS SPGIVKTCSP  720
NGKRVSPPHN ALGVSPSRKG GRKLILKSIP SFPSLAGDAN GGSATCSSDS ATALALGPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	455	461	PKKRRKS
2	456	460	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-79	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4BG004770.1