PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4BG004350.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 639aa MW: 70601.3 Da PI: 5.075 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.4 | 5.6e-09 | 401 | 438 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gLt +q+++WF N R + TRIDC4BG004350.4 401 FEHflHPYPKDSEKLMLARQTGLTRSQISNWFINARVR 438 664559******************************88 PP | |||||||
2 | BELL | 120.1 | 9.7e-39 | 264 | 335 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e+qelq+k akLl +l+eVd++Yk+y +q+q+v+ssF+++ag g+akpYt++Al++iSrhFrcLkdai +q+ TRIDC4BG004350.4 264 EKQELQNKMAKLLAMLDEVDRKYKHYFHQMQIVVSSFDMIAGSGAAKPYTAVALQTISRHFRCLKDAINDQV 335 689******************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 639 aa Download sequence |
MSNYYSSPGD ERDPQTMYSP DTGNASYPVP SALGNLLYSN NASSVPYTEF SGIIQSQQNF 60 MELHGHPSEH SSSREPPNMV TSLTEQSSFA PVKDMRNEML MHFMDGAQSG AGGGDLIHND 120 AHSSAQLDFG LLNNPSSASV PLAPGQGLSL SLNTHILAPS YPYWSPKPDL LTTQSYQGDE 180 NGMKNMQSEA SRAIRNSKYL KAAQELLDEI VSVWKSIKQN AQKDKVEAGK MDGKDADEVL 240 KSEGVSSNPQ ESTANAEPEI SAAEKQELQN KMAKLLAMLD EVDRKYKHYF HQMQIVVSSF 300 DMIAGSGAAK PYTAVALQTI SRHFRCLKDA INDQVNVIRK KLGEEDSSSG REGKLTRLRY 360 IDQQLRQQRA FQQYGMLQQN AWRPQRGLPE NSVSILRAWL FEHFLHPYPK DSEKLMLARQ 420 TGLTRSQISN WFINARVRLW KPMIEDMYKE ETGEAELDSN SSSDNLPRSK DKMASCEDKE 480 DLKCSMSQGQ AYQTSEFKAN MEMAGLTGAP PSFHSEANSD DGFMNLLLKD QRPGEADGGL 540 LHGDESARFM AYHLAELGGY QNSNVSLTLG LQHAENSLSA PNAHRPGFTA GGGEEDIYNT 600 TGAHPGGGDA VASSDYEPTN QLDQRQQFEP SPLLHDFVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G34610.2 | 1e-122 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4BG004350.4 |