PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG003560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 22840 Da PI: 7.64 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 45.6 | 1.2e-14 | 15 | 61 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR++iN++f eL +++P + kK++Ka+iL A++++k+Lq TRIDC4BG003560.1 15 DHIMAERKRREKINQRFIELSTVIPGL-----KKMDKATILSDATRHVKELQ 61 699************************.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
TGTGPVSSGP PYAQDHIMAE RKRREKINQR FIELSTVIPG LKKMDKATIL SDATRHVKEL 60 QEKIKALEAA TGRSNRSNET VVLIKKKPRH ADAAVSDQNQ NGSPSSASSG APASKNPLPE 120 IEVRFSETGV MVRILCHDVK GVVVRVLSEV EEGLHLTVTH TNVMPFTACT VIITITAKVD 180 EGFTVTAEEI VGRLNYVLEL HSSCTSTEEN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 25 | ERKRRE |
2 | 21 | 26 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 8e-43 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG003560.1 |