PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG003350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 329aa MW: 36017.2 Da PI: 7.2541 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.8 | 1.4e-18 | 35 | 117 | 2 | 84 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 Wt e+++Liea+++++++ + l ++W++v +++++ g++rs++qC+++w+nl ++ykk+++ + ++++ p + + TRIDC4BG003350.1 35 WTLPETMLLIEAKKRVHSERHPADLGLGRWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYGEHAGAGAEAPRPSYWE 117 ***************************************************************98766654555555555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MDAKGSGGAH REGEETGNVM AGAMTVAREY RRGNWTLPET MLLIEAKKRV HSERHPADLG 60 LGRWRWVEDY CWRAGCRRSQ NQCNDRWDNL MRDYKKVRAY GEHAGAGAEA PRPSYWEMAR 120 AERKARYLPS NLLREIYEAM AEIVERRTGF SGAGGPFLGA PPPPMASTGL VGVPMQASPL 180 AQVQPRPLEE TRCSSESSPE RKRLRLSLDG QPGSSRSTPA SAAGHNDRHQ EPQGDDREIS 240 SDDAEEHDEL SGAIGQCAAI LSGALESREA AEERRHREVM AVEERRSVAR QARREAGEQC 300 MAGLAAAVGQ LAGSMLALAA KHEGPAAPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31310.1 | 2e-41 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG003350.1 |