PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG002480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 1075aa MW: 116894 Da PI: 5.9737 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 96.2 | 3.7e-30 | 75 | 183 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkekdgk 75 fYn YA++vGFs+r+s +++s+r+g+i++r+fvC keg+r+ + k+ + rrtra+tr+gCka+++vkk++ gk TRIDC4BG002480.1 75 FYNLYAHRVGFSTRISVMHRSRRDGSIMSRQFVCAKEGFRTYRGKHeqaaalasspggpagaddgGRGGRRTRAVTRVGCKAMIRVKKQDGGK 167 *******************************************9999***************9998999************************ PP FAR1 76 wevtkleleHnHelap 91 w +tkle+ HnH+l+p TRIDC4BG002480.1 168 WAITKLETAHNHPLVP 183 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1075 aa Download sequence |
MERVAAGSSE QGTPDSEMGD GDNDSVGYGT EMELDPAPTP GSAPAAAYPA RPSVHDGVDP 60 FEGMEFDDEE DAWTFYNLYA HRVGFSTRIS VMHRSRRDGS IMSRQFVCAK EGFRTYRGKH 120 EQAAALASSP GGPAGADDGG RGGRRTRAVT RVGCKAMIRV KKQDGGKWAI TKLETAHNHP 180 LVPQNQAHCL RPHKPLSECG KQRSSSSYGV RRNGGMFLAI EPPTPPTPPV PQTSIIPQPA 240 VVPHYITDGI GNATRVILDY VKRMQAEDPA FFYAMQFVEG HPVGNVFWSD ARARTAYKDF 300 GDAVFLDDHC KRSKYELPLV TFTGVNHHCQ PVLFGCAVIR DNSEASFAWL FETLLLAMSG 360 QHPVSLTTEY DGAIQSAVHK VLPHTRHRFC RWHILNEAQG KLSDFLNAFP AFYDDFVNCI 420 NMSETIDEFE ANWEALISKV GSGHNEWLDS MYNCRQQWVP VYLRDTFFGD EPSRQGCMSR 480 SSFFESHITA KTDSQSFIQQ YEKALDSCYE REVKEEFETK YSLPDIKTPS PIEKQGADLY 540 TRMLFLRFQQ EVIGASVSTL EVAEEHGKAC TYKVTTSQGS EKPRMVQFNS SDSSAKCTCQ 600 MFECLGIACR HILTVFGAQG VSTLPSQYIM KRWTKNATDR SSDKKPDEVV RVKELKEQRS 660 STVEDGEQSQ TWRYNNLCRE ALRYAEEGAS SVEVYIVAMQ ALQEAANKVN MAKRGIGQVA 720 APLAVMPITA QLPECSGKIQ DSFGQQKKRK RNSNNPRENS APNQFMHMQQ PSNHLFVGPS 780 TSGGSQGHSQ LVAAIPVSSY AQHGQTSGAH NSTDGNMATA SVAVDKFHGF SDRDASTTAP 840 SSGNVVQAGE TKSSGVASQI NESHELPQAN GNKGSSVNTV NSTASPQLVT VPIGFCLPSM 900 DNSKMPTAGM NSTNSGGMMS NGNASFGIRQ CQSSAQVPAT HSEAKALAEN TESRATTADS 960 SSIRAAAIAA GARIASPSDA ASIIKAAQSK DAIHIRPGES LPNQLKPLAP RPLSSLAPAS 1020 APSSAQHLQQ PAQNSFGDST AAKEAIFGST DGSDGDEYED EDTDDDDDDD EGEQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-161 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG002480.1 |