PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4BG001700.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 297aa    MW: 32182.9 Da    PI: 6.8427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4BG001700.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.74.3e-16108158255
               AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       g  GVr ++ +g+++AeIrd    + k +r++lg+f t+e Aa a+++a+ + +g
  TRIDC4BG001700.2 108 GLIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFNTPEAAAMAYDQAAFSVRG 158
                       567******.**********32..2.24**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
LADDYHTSSP MSSAFDMGDT DDMHLLNTLL LHIQTGSASS HVEAAHYSLD LELDMEPSSS  60
STSSSSSYSS SEQQQKHHGM PTTAGQSPSN RRASQQQQPH PAPAATKGLI GVRKRPWGKF  120
AAEIRDSTRK GARVWLGTFN TPEAAAMAYD QAAFSVRGAA AVLNYPVDRV QESLRTLALR  180
PDVPGGSPVL ALKRRHSIRK RSPNKAKKTA LEPTNTKMME QSAAAMPAQQ QLLPVQSAGV  240
VELEDLGADY LEELLRVSDE PSTSSTMLMG AFDHHHHHHV DDQSALASTA PMLFPHC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.19e-44ERF family protein