PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4BG001610.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 230aa MW: 25308.2 Da PI: 6.0164 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 120.7 | 7.8e-38 | 20 | 120 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrr+C+++C++ap+f++eq +++fa++hk+FGasn +kll +lp ++r++a++++ yeA+ar++dPvyG+v++i++lqqq+ +l+a TRIDC4BG001610.1 20 PCGACKFLRRRCVNGCAFAPHFCHEQgAAHFAAIHKVFGASNASKLLMSLPATDRREAAATISYEAQARLHDPVYGCVAHIFALQQQVVNLQA 112 7*************************89***************************************************************** PP DUF260 93 elallkee 100 +l++lk++ TRIDC4BG001610.1 113 QLESLKAQ 120 **999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
QEYTTSIDQA PGAMTGFSSP CGACKFLRRR CVNGCAFAPH FCHEQGAAHF AAIHKVFGAS 60 NASKLLMSLP ATDRREAAAT ISYEAQARLH DPVYGCVAHI FALQQQVVNL QAQLESLKAQ 120 EPVQGRTNTC SVSSPEEDSI KAKAMAYQKG EARMPQPGHS VKIERERYFG NDAMTSCTSM 180 QYSQDYNSSH VYATDYPASF NDDSIHSSTM FPVDMQEYLQ ESGYYDAEGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 3e-51 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4BG001610.1 |