PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG069320.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 265aa MW: 29552.1 Da PI: 6.1815 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.9 | 4.8e-08 | 2 | 39 | 8 | 47 |
HHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 8 EdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 E++++++a ++ + W++I + +g +t q++s+ qky TRIDC4AG069320.3 2 EHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 39 9************77.*********.*************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 265 aa Download sequence |
PEHDKFIEAL LLFDRDWRKI EAFVGSKTVI QIRSHAQKYF LKVQKNGTGE HLPPPRPKRK 60 AAHPYPHNKA SKKAPEVDLP QQPPHVVEQG RVIPMDAPTV ATNSSANEDT FPSWDDVLTQ 120 PYSPRHTQDL GTANNSSSSI ECQSGTWPAS DAIEQEIWPT SDAIEQEIVL PALHAMPDFA 180 QVYNFLGGVF DPDTTGHLQK LREMDPIDAE TVLQLMKNLS VNLSSPDFET HRRMLSSHGG 240 GMGQARHESV GDPGSLLRPF AFHSW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G09600.1 | 1e-59 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG069320.3 |