PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG069320.13 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 222aa MW: 24632.4 Da PI: 6.7238 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.3 | 5.7e-11 | 37 | 81 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT E++++++a ++ + W++I + +g +t q++s+ qky TRIDC4AG069320.13 37 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 81 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
SERAMAAVME SSSVPGVDGG EGAEGRVRKP YTITKSRESW TDPEHDKFIE ALLLFDRDWR 60 KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT GEHLPPPRPK RKAAHPYPHN KASKKAPEVD 120 LPQQPPHVVE QGRVIPMDAP TVATNSSANE DTFPSWDDVL TQPYSPRHTQ DLGTANNSSS 180 SIECQSGTWP ASDAIEQEIW PTSDAIDHAR LCSSIQLSWG RI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.2 | 4e-41 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG069320.13 |