PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG069320.12
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 279aa    MW: 30971.8 Da    PI: 6.4218
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG069320.12genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.78.2e-113781147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       r +WT  E++++++a  ++  + W++I + +g  +t  q++s+ qky
  TRIDC4AG069320.12 37 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 81
                       789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
SERAMAAVME SSSVPGVDGG EGAEGRVRKP YTITKSRESW TDPEHDKFIE ALLLFDRDWR  60
KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT GEHLPPPRPK RKAAHPYPHN KASKKEQGRV  120
IPMDAPTVAT NSSANEDTFP SWDDVLTQPY SPRHTQDLGT ANNSSSSIEC QSGTWPASDA  180
IEQEIWPTSD AIEQEIVLPA LHAMPDFAQV YNFLGGVFDP DTTGHLQKLR EMDPIDAETL  240
LISARMKARS FCLHCLVTSQ LLASCYVSTS IQSVSYKNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-65MYB_related family protein