PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG067780.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 336aa    MW: 35632.3 Da    PI: 6.6163
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG067780.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.62.9e-181562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+llvd++++ G g+W++ ++  g++R++k+c++rw +yl
  TRIDC4AG067780.1 15 KGPWTPEEDKLLVDYIQEKGHGSWRRLPKLAGLNRCGKSCRLRWTNYL 62
                      79********************************************97 PP
2Myb_DNA-binding58.12e-1868113148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l
  TRIDC4AG067780.1  68 RGRFTEDEEKLIIHLHSLLGNK-WSSIATKLP-GRTDNEIKNYWNTHL 113
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MGRSPCCDGE AGVKKGPWTP EEDKLLVDYI QEKGHGSWRR LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGR FTEDEEKLII HLHSLLGNKW SSIATKLPGR TDNEIKNYWN THLRKKLLGM  120
GIDPVTHRPR TDLSLLAGLP GLLAAAGNFG GAGSATGAWD MNALRLQADA AKFQLLQGLV  180
RALTTAAVPA LAPGMDNLMA LLAASNGGQN GAGGVDQSML LQQCQWDGMN NLPALTNSAP  240
ASGMHNISGM FDSFGAGDGL SSTELGCHGG ASGSNVTVDA VAPPRPMVAN DRDCNNNGGG  300
GVSCEQTPAS SPFDGLESLN LMDDLNTDGS WKDLLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.25e-79MYB family protein