PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG067420.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 363aa MW: 41930.7 Da PI: 9.0598

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG067420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	7e-20	38	118	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn+YA ++GFs+rks+ k++ ++++i ++ vCs++ +re+e++k a+trtgC+a+++ + +++g w v+k++++HnH la TRIDC4AG067420.1 38 DMYNTYAGKIGFSIRKSQIKRR-QDRTISHKYIVCSNQEERETESSK--------ATTRTGCQARVQFSVSREGIWTVQKVVTDHNHYLA 118 58*************98887.777799999*9998887766........9*****************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
AMPKARLGSQ DKVVDKVGQA LIVPEVGKSF DSEQQAYDMY NTYAGKIGFS IRKSQIKRRQ 60 DRTISHKYIV CSNQEERETE SSKATTRTGC QARVQFSVSR EGIWTVQKVV TDHNHYLASP 120 NKLHKLRSQR RVVEADRALI GQIREAGMKP SQVYDFMVAF YGGVDKVPFS KMDCNNDIGK 180 HPSTIFTDQD RFLLDFKRCV YEDRSECIFK REWQELLEEY NLEDNEWMTK LYELRGKWAA 240 IYRDSFSADM NSTQRSEGLL CKHALKVFNM NDVFILPSQY ILNRWTKYAK RGFYIEKQGT 300 DTENLKTQAA RISRKATSVA LKCSTVKELL DDLEKAIDKL DLEADNSLSK MKEKSNEVPL 360 VLT

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

AMPKARLGSQ DKVVDKVGQA LIVPEVGKSF DSEQQAYDMY NTYAGKIGFS IRKSQIKRRQ  60
DRTISHKYIV CSNQEERETE SSKATTRTGC QARVQFSVSR EGIWTVQKVV TDHNHYLASP  120
NKLHKLRSQR RVVEADRALI GQIREAGMKP SQVYDFMVAF YGGVDKVPFS KMDCNNDIGK  180
HPSTIFTDQD RFLLDFKRCV YEDRSECIFK REWQELLEEY NLEDNEWMTK LYELRGKWAA  240
IYRDSFSADM NSTQRSEGLL CKHALKVFNM NDVFILPSQY ILNRWTKYAK RGFYIEKQGT  300
DTENLKTQAA RISRKATSVA LKCSTVKELL DDLEKAIDKL DLEADNSLSK MKEKSNEVPL  360
VLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-26	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG067420.1