PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG066220.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 740aa MW: 83270.9 Da PI: 6.5045

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG066220.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	72.1	1.3e-22	118	204	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ + +++i ++++ Cskeg +e ek + +e+ + ++trt+C+a+++ + +++g+w+v++l+++HnH+l+ TRIDC4AG066220.1 118 LYCDYGHRTGFSVRKGKQSYFTGTKRIRTKDYFCSKEGLKEAEKLT--DENFNDPHTRTNCRAMVRFRANSQGEWRVIRLVSDHNHNLV 204 7***************************************9988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
PRFRPLVSAE AMVNTDGEGA GAGGGDPMCV DESAAVVAEL GADQCEGARL QDSGAAVSIE 60 GAREGEVPVS HPGGGMRVRG ATVEEAENEE APTVQGSKEG AEELLLKVVY SEEEAYKLYC 120 DYGHRTGFSV RKGKQSYFTG TKRIRTKDYF CSKEGLKEAE KLTDENFNDP HTRTNCRAMV 180 RFRANSQGEW RVIRLVSDHN HNLVRPEERH LLRSAKSLIA GRSCSAADAV LYGGYQLGGA 240 PSQMAASTSV ANNAETQRQD LLPGFSGITR TSAVGTGELQ SIVSHLKSRA NVDGMFYWDV 300 QLDRAGRMSN FFWRDGRSRM DYDCFGDVVV FDSTYRLNKQ NYIVAPFVGV NHHWQTTMYG 360 CALLADDSMA SFTWLFKSFL EAMGNRQPRS IFTNQDQVMS NAIEEVFPNT CHRIAHWHIQ 420 KNAASRLGAL NASKAFNKMF TKCMQGCDSE AEFEGTWAAM LREFKLQDNK WLSKLYKLKQ 480 KWCGALNKCT FDGGVENEPQ CDSLSNIFTC IVDKSTSLST MVAAVDKLTE DWREKEFDED 540 VRCCQRPLSC IIKHSDILNH AAKVYTHRIY KLFETYFLDG CGATKFKALP CEDSDTYRFE 600 MTMQGRGSRV CTVHLNMSTM QLTCSCSQFE TMGLLCPHTL KALSIKNVGK IPEIYILKRW 660 TRDAKQWVFN PKQYESSFQE CMDDEAGYCN HAMRYAYDLV MKSEGQEELR RSLWQALESG 720 EKELEKYLEN ATQYPQSYAT

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

PRFRPLVSAE AMVNTDGEGA GAGGGDPMCV DESAAVVAEL GADQCEGARL QDSGAAVSIE  60
GAREGEVPVS HPGGGMRVRG ATVEEAENEE APTVQGSKEG AEELLLKVVY SEEEAYKLYC  120
DYGHRTGFSV RKGKQSYFTG TKRIRTKDYF CSKEGLKEAE KLTDENFNDP HTRTNCRAMV  180
RFRANSQGEW RVIRLVSDHN HNLVRPEERH LLRSAKSLIA GRSCSAADAV LYGGYQLGGA  240
PSQMAASTSV ANNAETQRQD LLPGFSGITR TSAVGTGELQ SIVSHLKSRA NVDGMFYWDV  300
QLDRAGRMSN FFWRDGRSRM DYDCFGDVVV FDSTYRLNKQ NYIVAPFVGV NHHWQTTMYG  360
CALLADDSMA SFTWLFKSFL EAMGNRQPRS IFTNQDQVMS NAIEEVFPNT CHRIAHWHIQ  420
KNAASRLGAL NASKAFNKMF TKCMQGCDSE AEFEGTWAAM LREFKLQDNK WLSKLYKLKQ  480
KWCGALNKCT FDGGVENEPQ CDSLSNIFTC IVDKSTSLST MVAAVDKLTE DWREKEFDED  540
VRCCQRPLSC IIKHSDILNH AAKVYTHRIY KLFETYFLDG CGATKFKALP CEDSDTYRFE  600
MTMQGRGSRV CTVHLNMSTM QLTCSCSQFE TMGLLCPHTL KALSIKNVGK IPEIYILKRW  660
TRDAKQWVFN PKQYESSFQE CMDDEAGYCN HAMRYAYDLV MKSEGQEELR RSLWQALESG  720
EKELEKYLEN ATQYPQSYAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-86	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG066220.1