PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG065110.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 371aa MW: 40028.4 Da PI: 8.797

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG065110.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.2	1.6e-24	110	154	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC4AG065110.1 110 DPEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVES 154 79****************************************986 PP
2	QLQ	63.2	6.9e-22	34	68	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+aQ+++L++Q+l+yKyL+a++PvPp+Ll++i+ TRIDC4AG065110.1 34 VFTPAQWAELEQQALIYKYLMAGVPVPPDLLLPIR 68 5********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MLSSSAAMGM GLGGYGQQQQ QQMQMQMQRG AGPVFTPAQW AELEQQALIY KYLMAGVPVP 60 PDLLLPIRPH HPAAGAAGTT FSFASPAASP FYHHHHPSMS YYAYYGKKLD PEPWRCRRTD 120 GKKWRCSKEA HPDSKYCERH MHRGRNRSRK PVESKSASPA HQSQQPPLSA VTSAARDAEP 180 LPSLPAGAKT HGLSLGGAGS SQMHVDASSY GGKYSLGAKS DVGELSFFSG ASGNNNRGFT 240 IDSPTDSSWH SMGSSLPPYQ LSKPRDSGLM QGGFSYSHYE PSQELGQVTI ASLSHSQEQD 300 RRSFGGGGGG GGGGGGGLMG NVKQENQPLR PFFDEWPGRR DSWSEMDDER SNGTSFSTTQ 360 LSISIPMPRC D

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MLSSSAAMGM GLGGYGQQQQ QQMQMQMQRG AGPVFTPAQW AELEQQALIY KYLMAGVPVP  60
PDLLLPIRPH HPAAGAAGTT FSFASPAASP FYHHHHPSMS YYAYYGKKLD PEPWRCRRTD  120
GKKWRCSKEA HPDSKYCERH MHRGRNRSRK PVESKSASPA HQSQQPPLSA VTSAARDAEP  180
LPSLPAGAKT HGLSLGGAGS SQMHVDASSY GGKYSLGAKS DVGELSFFSG ASGNNNRGFT  240
IDSPTDSSWH SMGSSLPPYQ LSKPRDSGLM QGGFSYSHYE PSQELGQVTI ASLSHSQEQD  300
RRSFGGGGGG GGGGGGGLMG NVKQENQPLR PFFDEWPGRR DSWSEMDDER SNGTSFSTTQ  360
LSISIPMPRC D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG065110.1