PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG059520.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 151aa MW: 16418.9 Da PI: 10.4163 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 35.6 | 1.6e-11 | 4 | 28 | 32 | 56 |
HHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 32 eLAkklgLterqVkvWFqNrRakek 56 LA++lgL rqV vWFqNrRa+ k TRIDC4AG059520.2 4 ALANSLGLRPRQVEVWFQNRRARTK 28 79*********************98 PP | |||||||
2 | HD-ZIP_I/II | 87.5 | 1.7e-28 | 1 | 64 | 28 | 92 |
HD-ZIP_I/II 28 rKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC4AG059520.2 1 QKLALANSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNRRLEKEVAELR-ALK 64 799*********************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
QKLALANSLG LRPRQVEVWF QNRRARTKLK QTEVDCEYMK RWCEQLAEQN RRLEKEVAEL 60 RALKATPPAH NGAAAGPLTT LTMCLSCKRV ASTSSASACT VPSFSANAGI GMPMPSPVAQ 120 PEHRQFFCGF RDTGAAYGGP AGLTKVVKAA R |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 23 | 31 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 3e-38 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG059520.2 |