PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG059510.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 327aa MW: 35013.1 Da PI: 10.6727 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.6 | 1.2e-19 | 140 | 194 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee+F+ +++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC4AG059510.3 140 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTK 194 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.6 | 9.2e-40 | 140 | 230 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEe+F+++++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC4AG059510.3 140 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNKRLEKEVAELR-ALK 230 69*************************************************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
SRAPPAEETA RLGSARVGPG QGSDRGRQHA RAPWAMASHR VARKGKGSLT SSTTTASSSP 60 ASHWTAALSS VVGPQESYGL HQYAGHNQPR KEEPGMRTST SPESGVSAGT KRGLERTGSG 120 VSRAAGSDED DDGGDGAGGR KKLRLSKDQA AVLEECFKTH STLNPKQKTA LANRLGLRPR 180 QVEVWFQNRR ARTKLKQTEV DCEYMKRWCE QLAEQNKRLE KEVAELRALK AAPAVHAQQA 240 APAATLTMCP SCRRVAATTA GPAATQHQHQ QPQQCHPKPA AQPAGNVLPS HCQFFPSTTT 300 AAAPDRSGRQ QGAWNGAAQP LVTRELF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 197 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 1e-46 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG059510.3 |