PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG059510.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 321aa MW: 33925.8 Da PI: 10.1157

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG059510.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.6	1.2e-19	134	188	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee+F+ +++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC4AG059510.2 134 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTK 188 678899***********************************************98 PP
2	HD-ZIP_I/II	123.7	8.9e-40	134	224	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEe+F+++++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC4AG059510.2 134 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNKRLEKEVAELR-ALK 224 69*************************************************************************************9.555 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
PAPGSSQIGS GRAGERSTMH RAAAAGLDLG LGLGLGLASQ GSLTSSTTTA SSSPASHWTA 60 ALSSVVGPQE SYGLHQYAGH NQPRKEEPGM RTSTSPESGV SAGTKRGLER TGSGVSRAAG 120 SDEDDDGGDG AGGRKKLRLS KDQAAVLEEC FKTHSTLNPK QKTALANRLG LRPRQVEVWF 180 QNRRARTKLK QTEVDCEYMK RWCEQLAEQN KRLEKEVAEL RALKAAPAVH AQQAAPAATL 240 TMCPSCRRVA ATTAGPAATQ HQHQQPQQCH PKPAAQPAGN VLPSHCQFFP STTTAAAPDR 300 SGRQQGAWNG AAQPLVTREL F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	183	191	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06710.1	2e-46	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG059510.2