PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG057670.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

AP2

Protein Properties

Length: 293aa MW: 32290.4 Da PI: 10.457

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG057670.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	36.5	1.2e-11	38	90	8	55
AP2 8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 +++++gr++A+++d ++n k+ k+++lg + +e Aa+a++ a++k++g TRIDC4AG057670.4 38 RHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 90 799*********888854566447***********************98 PP
2	AP2	53	8.6e-17	133	184	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TRIDC4AG057670.4 133 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 184 89**99******99966...3.6***********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
GAGDKLVGGN AAAKRSSRFR GRIRDSVLRI NTAVYFCRHR WTGRFEAHLW DKGTWNPTQK 60 KKGKQVYLGA YNEEEAAARA YDLAALKYWG PTTYTNFPVV DYEKELKVMQ GVSREEYLAS 120 IRRKSNGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYSTQEE AARAYDIAAI 180 EYRGINAVTN FDLSTYIRWL KPGAAPAEAM SGLSGAPSPS STTTATTLIT PRDMGGLRLL 240 PPSRNSLSLL GDVGSMVFGG GPSPSPSPSS TTTALSLLLR SSVFQELVAQ QHQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	57	65	PTQKKKGKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	3e-79	AP2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG057670.4