PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG057670.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 278aa MW: 30511.4 Da PI: 10.4367 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.9 | 1.6e-15 | 16 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n k+ k+++lg + +e Aa+a++ a++k++g TRIDC4AG057670.3 16 SRFRGVSRHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 75 789******************888855566447*************************98 PP | |||||||
2 | AP2 | 53.1 | 7.9e-17 | 118 | 169 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TRIDC4AG057670.3 118 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 169 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
AGDKLVGGNA AAKRSSRFRG VSRHRWTGRF EAHLWDKGTW NPTQKKKGKQ VYLGAYNEEE 60 AAARAYDLAA LKYWGPTTYT NFPVVDYEKE LKVMQGVSRE EYLASIRRKS NGFSRGVSKY 120 RGVARHHHNG RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYRGI NAVTNFDLST 180 YIRWLKPGAA PAEAMSGLSG APSPSSTTTA TTLITPRDMG GLRLLPPSRN SLSLLGDVGS 240 MVFGGGPSPS PSPSSTTTAL SLLLRSSVFQ ELVAQQHQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 50 | PTQKKKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-84 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG057670.3 |