PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG057670.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 322aa MW: 35698.7 Da PI: 11.8435 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 48.6 | 2e-15 | 16 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n k+ k+++lg + +e Aa+a++ a++k++g TRIDC4AG057670.2 16 SRFRGVSRHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 75 789******************888855566447*************************98 PP | |||||||
2 | AP2 | 52.8 | 1e-16 | 118 | 169 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TRIDC4AG057670.2 118 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 169 89****99**********99966...3.6*************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
AGDKLVGGNA AAKRSSRFRG VSRHRWTGRF EAHLWDKGTW NPTQKKKGKQ VYLGAYNEEE 60 AAARAYDLAA LKYWGPTTYT NFPVVDYEKE LKVMQGVSRE EYLASIRRKS NGFSRGVSKY 120 RGVARHHHNG RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYRGI NAVTNFDLST 180 YIRWLKPGAA PAEAHADHAE GHGRPPPPPA LAELAFSARR RGLDGVWRRP LPVPVPVVHH 240 HGAQPASAVV RVPGARRAAA PAGRGRRRRP GGGACAGERA RGGAVRLRRR RGRGRGVLVL 300 HVRARRQLRA HRGLPLGLLG KL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 50 | PTQKKKGKQ |
2 | 286 | 293 | RLRRRRGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-83 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG057670.2 |