PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG057670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | AP2 | ||||||||
Protein Properties | Length: 206aa MW: 23187.1 Da PI: 10.4386 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.7 | 9.3e-16 | 16 | 75 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d ++n k+ k+++lg + +e Aa+a++ a++k++g TRIDC4AG057670.1 16 SRFRGVSRHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 75 789******************888855566447*************************98 PP | |||||||
2 | AP2 | 53.8 | 4.7e-17 | 118 | 169 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g TRIDC4AG057670.1 118 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 169 89****99**********99966...3.6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
AGDKLVGGNA AAKRSSRFRG VSRHRWTGRF EAHLWDKGTW NPTQKKKGKQ VYLGAYNEEE 60 AAARAYDLAA LKYWGPTTYT NFPVVDYEKE LKVMQGVSRE EYLASIRRKS NGFSRGVSKY 120 RGVARHHHNG RWEARIGRVF GNKYLYLGTY STQEEAARAY DIAAIEYRGI NAVTNFDLST 180 YIRWLKPGAA PAEAMSGLSG APSPRI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 50 | PTQKKKGKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54320.3 | 1e-85 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG057670.1 |