PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056280.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 311aa MW: 34030.6 Da PI: 4.6433

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056280.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.3	1.5e-19	57	108	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ eq+++Le+ Fe +++++ e+++++A+ lgL rqV vWFqNrRa++k TRIDC4AG056280.3 57 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 108 467789*********************************************9 PP
2	HD-ZIP_I/II	128.9	2.1e-41	55	146	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prqvavWFqnrRAR+ktkqlE+d++aL++++dal+++ ++L++++++L++e++e TRIDC4AG056280.3 55 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEIHE 146 9**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
HLRRAIGIGM GEKLAFAEKE NLLAAYMEHD EPELEEADEE EEEEERAMSC GLGGKKRRLA 60 LEQVRALERS FETDNKLDPE RKARIARDLG LHPRQVAVWF QNRRARWKTK QLERDFNALR 120 ARHDALRADC DALRRDKDAL AAEIHELREK LSTKPETSVK AEAAGNADAA EERLQQATMI 180 GAAVCKDGSS DSDSSAVFND EASPYSGAVF EQQGFMGFGA SFLDSASAAA ATTGGGCSSL 240 PMLEPKWPGA YPYDAGRSGG YGFTEEWLAG SDAIGNDGSA AFFSEEHVSN LNFGWCSSGA 300 EGFDLQSYCK K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	103	111	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	2e-30	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056280.3