PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056280.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 318aa MW: 34921.5 Da PI: 4.6618

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056280.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.2	1.6e-19	64	115	5	56
SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 5 ttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ eq+++Le+ Fe +++++ e+++++A+ lgL rqV vWFqNrRa++k TRIDC4AG056280.2 64 RRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWK 115 467789*********************************************9 PP
2	HD-ZIP_I/II	128.5	2.8e-41	62	153	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrl+ eqv++LE+sFe+++kL+perK+++ar+Lgl+prqvavWFqnrRAR+ktkqlE+d++aL++++dal+++ ++L++++++L++e++e TRIDC4AG056280.2 62 KKRRLALEQVRALERSFETDNKLDPERKARIARDLGLHPRQVAVWFQNRRARWKTKQLERDFNALRARHDALRADCDALRRDKDALAAEVHE 153 9**************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MKRQIKRPTR SQESPDAGEK LAFAEKENLL AAYMEHDEPE LEEADEEEEE EERAMSCGLG 60 GKKRRLALEQ VRALERSFET DNKLDPERKA RIARDLGLHP RQVAVWFQNR RARWKTKQLE 120 RDFNALRARH DALRADCDAL RRDKDALAAE VHELREKLST KPETSVKAEA AGNADAAEER 180 LQQATMIGAA VCKDGSSDSD SSAVFNDEAS PYSGAVFEQQ GFMGFGASFL DSASAAAATT 240 GGGCSSLPML EPKWPGAYPY DAGRSGGYGF TEEWLAGSDA IGNDGSAAFF SEEHVSNLNF 300 GWCSSGAEGF DLQSYCKK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	118	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-30	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056280.2