PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG056040.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1025aa MW: 114850 Da PI: 6.0087

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG056040.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	175.5	7.2e-55	6	122	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenpt 93 ke ++rwl+++ei++iL+n+++++++ e+++ p sgsl+L++rk++r+frkDG++w+kkkdgktv+E+he+LK g+++vl+cyYah+een + TRIDC4AG056040.11 6 KEaQTRWLRPTEICEILKNYRNFRIAPEPPNMPASGSLFLFDRKVLRFFRKDGHNWRKKKDGKTVKEAHERLKSGSIDVLHCYYAHGEENIN 97 5559************************************************************************************** PP CG-1 94 fqrrcywlLeeelekivlvhylevk 118 fqrr+yw+Lee++ +ivlvhylevk TRIDC4AG056040.11 98 FQRRSYWMLEEDYMHIVLVHYLEVK 122 ********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1025 aa Download sequence
MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN 60 WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE 120 VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SADIYSGGAG 180 YHSISRMQQH ENGGGSIIDA SVVSSYSPAS SVGNHQGLQA TSPNTGFYSH YQDNSPVIHN 240 ESTFGITFNG PSTQFDLSSW NEMTKLNKEI HQLPPYQSHV PSEQPPFTEG PGIESFSFDE 300 VYSNGLDIKD DGHADTDREA LWQLPSATDS TFATVDNFEQ HNKLLEEAIN FPVLKTQSSN 360 LSDILKNSFK KSDSFTRWMS KELAEVDDSQ VKFSSGLYWN SEDADNIIGA SSRDQLDQFT 420 LDPMVAQDQL FSITEYFPSW TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL 480 ADGTLRCYSP SHKPGRVPFY VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ 540 ACLDELLSLG RDQQDEFQAA LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD 600 DRQDQFVESG IKEKLHIWLL HKAGGGGKGP SVLDDEGQGI LHLAAALGYD WAIRPTITAG 660 VSINFRDVHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG 720 HKGISGFLAE FSLTSHLQTL NLKEAMGSNA SEISGLPGIG DVTGRTASPS AGQGLQAGSM 780 GDPLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF 840 DPMHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI 900 LRWRRRGAGL RGFRSTEVAT DSSTSSSSVD VIPVKPAEDD YNFLQEGRKQ TEERLQRALA 960 RVKSMVQYPE ARDQYQRIMT VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP 1020 LPGYF

Sequence ? help Back to Top

Protein Sequence Length: 1025 aa Download sequence

MEQILKEAQT RWLRPTEICE ILKNYRNFRI APEPPNMPAS GSLFLFDRKV LRFFRKDGHN  60
WRKKKDGKTV KEAHERLKSG SIDVLHCYYA HGEENINFQR RSYWMLEEDY MHIVLVHYLE  120
VKAGKSSSRT RGHDNMLQGA YVDSPLSHLP SQSTDGESSL SGRASEYEAE SADIYSGGAG  180
YHSISRMQQH ENGGGSIIDA SVVSSYSPAS SVGNHQGLQA TSPNTGFYSH YQDNSPVIHN  240
ESTFGITFNG PSTQFDLSSW NEMTKLNKEI HQLPPYQSHV PSEQPPFTEG PGIESFSFDE  300
VYSNGLDIKD DGHADTDREA LWQLPSATDS TFATVDNFEQ HNKLLEEAIN FPVLKTQSSN  360
LSDILKNSFK KSDSFTRWMS KELAEVDDSQ VKFSSGLYWN SEDADNIIGA SSRDQLDQFT  420
LDPMVAQDQL FSITEYFPSW TYAGSKTRVL VTGRFLTSDE VIKLKWSCMF GEVEVPADIL  480
ADGTLRCYSP SHKPGRVPFY VTCSNRLACS EVREFEYRPS DSQYMDAPSP HGATNKIYLQ  540
ACLDELLSLG RDQQDEFQAA LSNPTKELID LNKKITSLMT NNDQWSELLK FADDNQLAPD  600
DRQDQFVESG IKEKLHIWLL HKAGGGGKGP SVLDDEGQGI LHLAAALGYD WAIRPTITAG  660
VSINFRDVHG WTALHWAAFC GRERTVVALI ALGAAPGALT DPRPDFPSGR TPADLASFNG  720
HKGISGFLAE FSLTSHLQTL NLKEAMGSNA SEISGLPGIG DVTGRTASPS AGQGLQAGSM  780
GDPLGAVRNA AQAAARIYQV FRVQSFQRKQ AVQYEDDNGV ISDERAMSLL SYKPSKPGQF  840
DPMHAAATRI QNKFRGWKGR KEFLLIRQRI VKIQAHVRGH QVRKHYRKII WSVGIVEKVI  900
LRWRRRGAGL RGFRSTEVAT DSSTSSSSVD VIPVKPAEDD YNFLQEGRKQ TEERLQRALA  960
RVKSMVQYPE ARDQYQRIMT VVTKMQESQP VEESMLEEST EMDEGFLMSE FKELWDDDMP  1020
LPGYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG056040.11