PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG053710.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 816aa MW: 89256 Da PI: 5.1362

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG053710.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.2	3e-40	154	231	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC4AG053710.5 154 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 231 5**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 816 aa Download sequence
MDMEAARVGS QSRHLYGGGL GGELEQARRE KRVFGWDLND WSWDSERFVA TPVPAAVGNG 60 LSLNSSPSSS EEAGAEVSRN GNVRGDFDKR KRVVVIHDDD EKDEGPVGSS NNVLSLRIGG 120 NSVAGGAVED GGVNEEDRNG KKIRVQGGSS SGPACQVEGC CADLSAAKDY HRRHKVCEMH 180 AKANTAVVGN TVQRFCQQCS RFHLLQEFDE GKRSCRRRLA GHNKRRRKTR PENAVGGTPI 240 EEKVSSYLLL SLLGICANLN SDNAEHLQGQ ELLSNLWRNL GNVAKSLDPK ELCKLLETCQ 300 SMQNRSNAGT SEAANALVNT AAAEAAGPSN SKAPFANGGE CGQTSSAVVP VQSNATMVAA 360 TETPACKFRN FDLNDTCNDM EGFEDGSNCP SWIRQDSTQS PPQTSGNSDS TSAQSLSSSN 420 GDAQCRTDKI VFKLFEKVPS ELPPILRSQI LGWLSSSPTD IESHIRPGCI ILTVYLRLVE 480 SSWRELSENM SVYLDKLSSS SADNFWTSGL VFVMVRRQIA FMHNGQVMLD RPLAPNSHHY 540 CKVLCVSPVA APYSATVNFR VEGFNLVSSS SRLICSIEGR CIFEEDTAIM ADDAEDEDIE 600 YLNFCCSLPD TRGRGFIEVE DSGFSNGFFP FIVAEQNVCS EVCELESTFK SSSLEQPDKD 660 NAMNQALEFL HELGWLLHRV NIISKHDKVE PPVPAFNLLR FRNLGIFAME REWCAVTKML 720 LDLLFDGFVD AGLQSPKEVV LSENLVHSAV RGKSARMVRF LLTYKPNKNL KETAETYLFR 780 PDARGPSAFT PLHIAASTSD AEDVLDALTD DPGLVC

Sequence ? help Back to Top

Protein Sequence Length: 816 aa Download sequence

MDMEAARVGS QSRHLYGGGL GGELEQARRE KRVFGWDLND WSWDSERFVA TPVPAAVGNG  60
LSLNSSPSSS EEAGAEVSRN GNVRGDFDKR KRVVVIHDDD EKDEGPVGSS NNVLSLRIGG  120
NSVAGGAVED GGVNEEDRNG KKIRVQGGSS SGPACQVEGC CADLSAAKDY HRRHKVCEMH  180
AKANTAVVGN TVQRFCQQCS RFHLLQEFDE GKRSCRRRLA GHNKRRRKTR PENAVGGTPI  240
EEKVSSYLLL SLLGICANLN SDNAEHLQGQ ELLSNLWRNL GNVAKSLDPK ELCKLLETCQ  300
SMQNRSNAGT SEAANALVNT AAAEAAGPSN SKAPFANGGE CGQTSSAVVP VQSNATMVAA  360
TETPACKFRN FDLNDTCNDM EGFEDGSNCP SWIRQDSTQS PPQTSGNSDS TSAQSLSSSN  420
GDAQCRTDKI VFKLFEKVPS ELPPILRSQI LGWLSSSPTD IESHIRPGCI ILTVYLRLVE  480
SSWRELSENM SVYLDKLSSS SADNFWTSGL VFVMVRRQIA FMHNGQVMLD RPLAPNSHHY  540
CKVLCVSPVA APYSATVNFR VEGFNLVSSS SRLICSIEGR CIFEEDTAIM ADDAEDEDIE  600
YLNFCCSLPD TRGRGFIEVE DSGFSNGFFP FIVAEQNVCS EVCELESTFK SSSLEQPDKD  660
NAMNQALEFL HELGWLLHRV NIISKHDKVE PPVPAFNLLR FRNLGIFAME REWCAVTKML  720
LDLLFDGFVD AGLQSPKEVV LSENLVHSAV RGKSARMVRF LLTYKPNKNL KETAETYLFR  780
PDARGPSAFT PLHIAASTSD AEDVLDALTD DPGLVC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG053710.5