PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG053710.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SBP | ||||||||
Protein Properties | Length: 495aa MW: 53587.4 Da PI: 6.6344 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.2 | 1.5e-40 | 154 | 231 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC adls ak+yhrrhkvCe+h+ka++++v ++ qrfCqqCsrfh l+efDe+krsCrrrLa+hn+rrrk+++ TRIDC4AG053710.2 154 ACQVEGCCADLSAAKDYHRRHKVCEMHAKANTAVVGNTVQRFCQQCSRFHLLQEFDEGKRSCRRRLAGHNKRRRKTRP 231 5**************************************************************************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MDMEAARVGS QSRHLYGGGL GGELEQARRE KRVFGWDLND WSWDSERFVA TPVPAAVGNG 60 LSLNSSPSSS EEAGAEVSRN GNVRGDFDKR KRVVVIHDDD EKDEGPVGSS NNVLSLRIGG 120 NSVAGGAVED GGVNEEDRNG KKIRVQGGSS SGPACQVEGC CADLSAAKDY HRRHKVCEMH 180 AKANTAVVGN TVQRFCQQCS RFHLLQEFDE GKRSCRRRLA GHNKRRRKTR PENAVGGTPI 240 EEKVSSYLLL SLLGICANLN SDNAEHLQGQ ELLSNLWRNL GNVAKSLDPK ELCKLLETCQ 300 SMQNRSNAGT SEAANALVNT AAAEAAGPSN SKAPFANGGE CGQTSSAVVP VQSNATMVAA 360 TETPACKFRN FDLNDTCNDM EGFEDGSNCP SWIRQDSTQS PPQTSGNSDS TSAQSLSSSN 420 GDAQCRTDKI VFKLFEKVPS ELPPILRSQI LGWLSSSPTD IESHIRPGCI ILTVYLRLVE 480 SSWREVHLFH NHFRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47070.1 | 3e-90 | SBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG053710.2 |