PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG053450.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 99aa    MW: 11453.4 Da    PI: 9.4218
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG053450.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.92.8e-16790187
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
                      f+k++t+  +++ + +++p +f+e+        +  ++l +e   ++++ ++ +k++++ +l+kGW+eF+  ++L+ gD +vF+l+++
  TRIDC4AG053450.6  7 FVKTMTHVCASRAKPMMIPTHFIEHLpA----HDEAVVLVNEADVEFKMLCSASKQGRHRYLSKGWREFAVHHDLENGDCLVFHLIES 90
                      899999999999999********55532....3457***************999999999************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
RIRRPAFVKT MTHVCASRAK PMMIPTHFIE HLPAHDEAVV LVNEADVEFK MLCSASKQGR  60
HRYLSKGWRE FAVHHDLENG DCLVFHLIES AMFKSKPRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-15B3 family protein