PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG052860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 262aa    MW: 28249.1 Da    PI: 7.9096
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG052860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.11.6e-062345123
                      EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                      + C+ Cgk F+r  nL+ H+r H
  TRIDC4AG052860.2 23 HCCKVCGKGFKRDANLRMHMRGH 45
                      569******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
EEGEGPYEVV QIEKEAILAP HAHCCKVCGK GFKRDANLRM HMRGHGDQYK APGALARPGS  60
PAPGAGTERR FFYSCPYAGC KRNREHRDFQ PLKTPVCVKN HYRRSHCDKS HVCCRCGVKR  120
FSVLADLRTH EKHCGRDRWV CSCGVSFSRK DKLFAHVAIF DGGHTPALPP SDDEATGHCT  180
AATATATAIN SVLVPGSGGL LPTGGEEAVN LMEQSFSGQM LDGLNCSGAK VGIDDVRAKL  240
SSPVGIDFCD FDGFDLLGAV AM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.38e-84C2H2 family protein