PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG050170.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CAMTA | ||||||||
Protein Properties | Length: 207aa MW: 23285.7 Da PI: 6.152 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 109.1 | 2.7e-34 | 8 | 86 | 36 | 116 |
CG-1 36 sgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 gsl+L nr+ r+frkDG++w+k k+g E+h++LKvg+v++l+cyYa +++np fqrrcyw+Le ++++ivlvhy++ TRIDC4AG050170.6 8 GGSLFLQNRRLNRFFRKDGHEWRKNKNGG--LEAHKRLKVGNVDALSCYYAYGRKNPYFQRRCYWMLEPAYDHIVLVHYMS 86 69*************************96..6***********************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
YNSTISLGGS LFLQNRRLNR FFRKDGHEWR KNKNGGLEAH KRLKVGNVDA LSCYYAYGRK 60 NPYFQRRCYW MLEPAYDHIV LVHYMSIAEG NSNLSCVTEV SSSLQTCGVT ETGQSYSNLS 120 SVTEVSSRSA SKESNYNVGM LDYNIGIPDC NIVMPEAQER GQSSVEHTNE ARPKDDRGLT 180 EALEAIANHL LGDDDNGHIY NSDQSQE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67310.1 | 9e-26 | CAMTA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG050170.6 |