PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG050170.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 955aa MW: 106985 Da PI: 8.7965

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG050170.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	67.2	2.7e-21	885	955	3	75
CG-1 3 kekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKv 75 k + wlk++e++ iLen+e++ + ++++++p sgsl+L nr+ r+frkDG++w+k k+g E+h++LK+ TRIDC4AG050170.3 885 KAMSCWLKPSEVLYILENYERFWIPSKTPNKPASGSLFLQNRRLNRFFRKDGHEWRKNKNGG--LEAHKRLKI 955 34788*****************************************************96..6*****7 PP

Sequence ? help Back to Top
Protein Sequence Length: 955 aa Download sequence
RRRNSRRGSK TTRLPEKLKR RLWMANKIRE FSVRSQEALG RYSLFSRDGV GAAASRCDTS 60 FGFWHLRGEH ANHLVGIDGP MNTLEVWLAK GGEQKLKFVS IVGSGGVGKT TLASEVYHRI 120 GGQFECHAFV QSSQKPDIRR LLISFLSQIQ PNQPPSNWKV HSLIAHIRAH LQDKRYLIVV 180 DDVWATTTWD IVNYALPDGN CNSRILITTE IEDVALKCCG YDPSYVFKMK PLGEDDSRKI 240 FLSAVVAPPE SIEISNSIIR KCGGLPLATV TIASLLASQM GKPEQWNYVD KFLSYGLRTN 300 PTLQGMQQVL NLSYNNLPPH LKACLLYLSI YQEGHVIWKD DLAKQWIAEG FIRATEGKDE 360 EEMSGAYFDE LISSRMIQPI YTSDTCEILS CTVHYMVVDF VKHKSNEENF VTAIDHSQTS 420 RTLSDKVRRL SLHFGNAEDA APPTNMRLSQ VRTLAFFGVI SCLPSMIEFR LLQVLILQFW 480 GDDESISLDL TTILELFRLR YLQVTCNVNL EVQATKVQGL KFLETLKIDA RASTVPEDIT 540 HLPHLLHLIL PADTNLPNGI GHMTSLRTLG YFDIGTNSME TLQRLGKLTN LQDLQLTIHT 600 LPSENLKNNM LCLGSILCKL SNLKSLTLAP VGVGSSCINC QNVAVGERMI ISGDDLSNVS 660 SPQALLQRLK LSSRVCIFSS LPKWVGHLCK LSILKIGVSE LTGNDVEVLR GLPALTALSL 720 YVCTKLAEQI VFNKAGFSVI RYFKFQCSVP WLKFEAGAMP NLRKLKLGFN SSGVDQHGTA 780 AIIIEQLSGL EDISAEIGGA GIDWESVLAN TIRNHPSNPR INIQLKDCTF YGHTSMGTKQ 840 KGHMNKNDNS GEDEKKQADS GVFTLSESSS RLHISGFDME VLLKKAMSCW LKPSEVLYIL 900 ENYERFWIPS KTPNKPASGS LFLQNRRLNR FFRKDGHEWR KNKNGGLEAH KRLKI

Sequence ? help Back to Top

Protein Sequence Length: 955 aa Download sequence

RRRNSRRGSK TTRLPEKLKR RLWMANKIRE FSVRSQEALG RYSLFSRDGV GAAASRCDTS  60
FGFWHLRGEH ANHLVGIDGP MNTLEVWLAK GGEQKLKFVS IVGSGGVGKT TLASEVYHRI  120
GGQFECHAFV QSSQKPDIRR LLISFLSQIQ PNQPPSNWKV HSLIAHIRAH LQDKRYLIVV  180
DDVWATTTWD IVNYALPDGN CNSRILITTE IEDVALKCCG YDPSYVFKMK PLGEDDSRKI  240
FLSAVVAPPE SIEISNSIIR KCGGLPLATV TIASLLASQM GKPEQWNYVD KFLSYGLRTN  300
PTLQGMQQVL NLSYNNLPPH LKACLLYLSI YQEGHVIWKD DLAKQWIAEG FIRATEGKDE  360
EEMSGAYFDE LISSRMIQPI YTSDTCEILS CTVHYMVVDF VKHKSNEENF VTAIDHSQTS  420
RTLSDKVRRL SLHFGNAEDA APPTNMRLSQ VRTLAFFGVI SCLPSMIEFR LLQVLILQFW  480
GDDESISLDL TTILELFRLR YLQVTCNVNL EVQATKVQGL KFLETLKIDA RASTVPEDIT  540
HLPHLLHLIL PADTNLPNGI GHMTSLRTLG YFDIGTNSME TLQRLGKLTN LQDLQLTIHT  600
LPSENLKNNM LCLGSILCKL SNLKSLTLAP VGVGSSCINC QNVAVGERMI ISGDDLSNVS  660
SPQALLQRLK LSSRVCIFSS LPKWVGHLCK LSILKIGVSE LTGNDVEVLR GLPALTALSL  720
YVCTKLAEQI VFNKAGFSVI RYFKFQCSVP WLKFEAGAMP NLRKLKLGFN SSGVDQHGTA  780
AIIIEQLSGL EDISAEIGGA GIDWESVLAN TIRNHPSNPR INIQLKDCTF YGHTSMGTKQ  840
KGHMNKNDNS GEDEKKQADS GVFTLSESSS RLHISGFDME VLLKKAMSCW LKPSEVLYIL  900
ENYERFWIPS KTPNKPASGS LFLQNRRLNR FFRKDGHEWR KNKNGGLEAH KRLKI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	22	RRGSKTTRLPEKLKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.3	2e-15	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG050170.3