PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG049360.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 233aa    MW: 24800.2 Da    PI: 10.7649
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG049360.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC26.11.8e-081402182098
             NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                       ++P+ar++ +++  +   +   e+  l+ ka elf+  ++  +  +a + +++++   ++++av + + ++fl d vp 
  TRIDC4AG049360.7 140 SFPMARVRLLMRDKDATIRSNNETVFLVNKASELFLEVFAKDAHQNALKERKKSITYENLSTAVCNEKRYKFLSDFVPL 218
                       79******99997776667778899999*******98888899999999***************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
QASDGAAKET PSKRKRDDAG EPQPQKSAKS AKKVDEATPT KKKQASSGGA EKATTPSKTP  60
QKKEAKSAKK SPGKAEKATP TKKQQASGGP EKATPSKRKH GDLESPKAAK SGQNGSSPAK  120
KQKGKAAGAA PVAAEPGTCS FPMARVRLLM RDKDATIRSN NETVFLVNKA SELFLEVFAK  180
DAHQNALKER KKSITYENLS TAVCNEKRYK FLSDFVPLRV TAGDALKAVV KEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11343KRKRDDAGEPQPQKSAKSAKKVDEATPTKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-22NF-YC family protein