PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG049360.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 247aa MW: 26315.1 Da PI: 10.8781 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 25.9 | 2.1e-08 | 154 | 232 | 20 | 98 |
NF-YC 20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++P+ar++ +++ + + e+ l+ ka elf+ ++ + +a + +++++ ++++av + + ++fl d vp TRIDC4AG049360.6 154 SFPMARVRLLMRDKDATIRSNNETVFLVNKASELFLEVFAKDAHQNALKERKKSITYENLSTAVCNEKRYKFLSDFVPL 232 79******99997776667778899999*******98888899999999***************************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
GKPKPKPTPK KAKQQASDGA AKETPSKRKR DDAGEPQPQK SAKSAKKVDE ATPTKKKQAS 60 SGGAEKATTP SKTPQKKEAK SAKKSPGKAE KATPTKKQQA SGGPEKATPS KRKHGDLESP 120 KAAKSGQNGS SPAKKQKGKA AGAAPVAAEP GTCSFPMARV RLLMRDKDAT IRSNNETVFL 180 VNKASELFLE VFAKDAHQNA LKERKKSITY ENLSTAVCNE KRYKFLSDFV PLRVTAGDAL 240 KAVVKEP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 7 | 14 | PTPKKAKQ |
2 | 27 | 57 | KRKRDDAGEPQPQKSAKSAKKVDEATPTKKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07980.1 | 4e-22 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG049360.6 |