PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG049360.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 244aa    MW: 26032.7 Da    PI: 10.8613
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG049360.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC262e-081512292098
             NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                       ++P+ar++ +++  +   +   e+  l+ ka elf+  ++  +  +a + +++++   ++++av + + ++fl d vp 
  TRIDC4AG049360.4 151 SFPMARVRLLMRDKDATIRSNNETVFLVNKASELFLEVFAKDAHQNALKERKKSITYENLSTAVCNEKRYKFLSDFVPL 229
                       79******99997776667778899999*******98888899999999***************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
KPKPTPKKAK QQASDGAAKE TPSKRKRDDA GEPQPQKSAK SAKKVDEATP TKKKQASSGG  60
AEKATTPSKT PQKKEAKSAK KSPGKAEKAT PTKKQQASGG PEKATPSKRK HGDLESPKAA  120
KSGQNGSSPA KKQKGKAAGA APVAAEPGTC SFPMARVRLL MRDKDATIRS NNETVFLVNK  180
ASELFLEVFA KDAHQNALKE RKKSITYENL STAVCNEKRY KFLSDFVPLR VTAGDALKAV  240
VKEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1411PTPKKAKQ
22454KRKRDDAGEPQPQKSAKSAKKVDEATPTKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.13e-22NF-YC family protein