PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG047700.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 316aa    MW: 35854.4 Da    PI: 5.0713
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG047700.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix64.72.1e-2026106286
          trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                       W++ e+++Li+++++++++lrrg+lk+++We+v+  +  r +g +++ +qC++k+e+l+kry+ ++++         s +p+f+++e
  TRIDC4AG047700.9  26 WSDGETMHLIDVYEDRWTKLRRGQLKAHQWEDVAGEVtrRCGGQRKTGTQCRHKLEKLRKRYRTEAARPVT------SLWPFFRRME 106
                       *************************************877889999******************9998885......68*******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
SRSEPPPAAE GPSAMEARKS APGQPWSDGE TMHLIDVYED RWTKLRRGQL KAHQWEDVAG  60
EVTRRCGGQR KTGTQCRHKL EKLRKRYRTE AARPVTSLWP FFRRMERLER GPVPVSTNSF  120
PASPPASDDD QDQDLDPEEE EEDEEEQEEE DEEQEEDQEE EEEQLLVARN TGSHTRSING  180
LVRDAGGFRG HQQQQQQQRR PSPPAVTLST APPRKRVSYE AAMFQSKAAA ADRAIKAEEA  240
PAVDHGSVAG VLRDIGEGIK RLERRRMEVQ WEIEQGWKET EARSNQMLQD AQRQLQDTLA  300
ALPPPGKKAR RDHGSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.13e-22Trihelix family protein