PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG047140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 231aa MW: 25382.2 Da PI: 5.4838 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 117.7 | 6.7e-37 | 19 | 119 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+l+r+C+++Cvlap++++eq +++fa++hk+FGasn +kll++lp ++r++a+ ++ yeA+ar++dPvyG+v++i++lqqq+ +l+a TRIDC4AG047140.1 19 PCGACKFLGRRCVNGCVLAPHLCHEQgAAHFAAIHKVFGASNASKLLTSLPATDRREAAVTISYEAQARQHDPVYGCVAHIFALQQQVVNLQA 111 7*************************89***************************************************************** PP DUF260 93 elallkee 100 +l++lk++ TRIDC4AG047140.1 112 QLESLKAQ 119 **999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
EYTTSIDQVA GAMTGFSSPC GACKFLGRRC VNGCVLAPHL CHEQGAAHFA AIHKVFGASN 60 ASKLLTSLPA TDRREAAVTI SYEAQARQHD PVYGCVAHIF ALQQQVVNLQ AQLESLKAQE 120 PVQGYTNTCS VSSPEEDSMK AKVMAYEKGE ARMPHPGHSV KIERESYFGN DAMTSCTSMQ 180 YSQDYNSSHV YTPDYTASFK FNDESIHGST MFPVDMQDYL QENGYYDTEG L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 8e-50 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG047140.1 |