PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG046680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YB | ||||||||
Protein Properties | Length: 218aa MW: 22803.6 Da PI: 6.1575 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 43.1 | 1e-13 | 111 | 181 | 26 | 96 |
NF-YB 26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 + kda e + fi ++++ a+d c+ kr+tin++d++ al ++ f ++vepl++ l+++r +++ TRIDC4AG046680.2 111 IVNKDAMAAFAESARIFIHYLSATANDVCKDGKRQTINAEDVFKALDEIEFPEFVEPLRTALEEFRSRNAA 181 478999999*********************************************************87665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MAGEAKEPEA AAQGEGSKPK TKAKKPKAAA AAAEEGEGAK ANKAKKPKPA AAAAEEGEGS 60 KAKKPAAAPV PAMAEAEVEE LPKAIVRRLV KDKLARAASG GEGAEGGAEV IVNKDAMAAF 120 AESARIFIHY LSATANDVCK DGKRQTINAE DVFKALDEIE FPEFVEPLRT ALEEFRSRNA 180 ARKPASGKKQ SEKKRKLDKE AVPEEQNGAA DEANAGED |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 3e-32 | NF-YB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG046680.2 |