PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG045640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 200aa    MW: 21376.4 Da    PI: 9.1158
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG045640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260141.13.6e-44401391100
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+C+++Cv+apyfp+ +p++fa vhk+FGasn++kll+++p e+r da+sslvyeA+ar+rdP+yG+vg i++lq+q+e+l+++
  TRIDC4AG045640.2  40 PCAACKLLRRRCSPGCVFAPYFPSGEPHRFASVHKVFGASNISKLLQEIPAEHRGDAVSSLVYEANARVRDPIYGCVGAITSLQRQVESLQTQ 132
                       7******************************************************************************************** PP

            DUF260  94 lallkee 100
                       lal+++e
  TRIDC4AG045640.2 133 LALAQAE 139
                       ***9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
CAHPPVHLLS SLWSPNLAIA GRKKRRGMKE VAAAGAGVSP CAACKLLRRR CSPGCVFAPY  60
FPSGEPHRFA SVHKVFGASN ISKLLQEIPA EHRGDAVSSL VYEANARVRD PIYGCVGAIT  120
SLQRQVESLQ TQLALAQAEM VRLRMANAYG AARHNGGGST ASGSPSSMSS PTKTADHHDM  180
AVDQSGVMEL ELECSRFWAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30130.12e-50LBD family protein