PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG045330.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 204aa MW: 22698.8 Da PI: 9.1292 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 61.6 | 1.8e-19 | 39 | 119 | 2 | 85 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt e+++Liea+++++e+ + l ++W++v +++++ g++rs++qC+++w+nl ++ykk+++ e ++ + p + ++ TRIDC4AG045330.3 39 WTLPETMLLIEAKKRVHEERHPADLGLARWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYEHAGAGA---EAPSYWEM 119 *****************************************************************99987422...24555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MDTKGSGAHR EGEETGNTMA GNVGAGAMTV AREYRRGNWT LPETMLLIEA KKRVHEERHP 60 ADLGLARWRW VEDYCWRAGC RRSQNQCNDR WDNLMRDYKK VRAYEHAGAG AEAPSYWEMA 120 RAERKARYLP SNLLREIYEA MGEIVERRMS FAGAGGPFLG APPPPPMVSS GLVGVPMQAS 180 PLAQVQPRPL GTPHAFSVSL AIAF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31310.1 | 3e-45 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG045330.3 |