PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG045330.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Trihelix | ||||||||
Protein Properties | Length: 328aa MW: 35904.1 Da PI: 6.3294 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 60.3 | 4.8e-19 | 39 | 119 | 2 | 85 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt e+++Liea+++++e+ + l ++W++v +++++ g++rs++qC+++w+nl ++ykk+++ e ++ + p + ++ TRIDC4AG045330.2 39 WTLPETMLLIEAKKRVHEERHPADLGLARWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYEHAGAGA---EAPSYWEM 119 *****************************************************************99987422...24555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MDTKGSGAHR EGEETGNTMA GNVGAGAMTV AREYRRGNWT LPETMLLIEA KKRVHEERHP 60 ADLGLARWRW VEDYCWRAGC RRSQNQCNDR WDNLMRDYKK VRAYEHAGAG AEAPSYWEMA 120 RAERKARYLP SNLLREIYEA MGEIVERRMS FAGAGGPFLG APPPPPMVSS GLVGVPMQAS 180 PLAQVQPRPL EETRGSSESS PERKRLRLSL DGQPGSSTPA SAAGHDDRHQ EPQGDDRESS 240 DDTEEYDELS GAIGQCAAIL SGALESREAA EERRHREVMA VEERRSVAKQ ARREAGEQCM 300 AGLAAAVGQL AGSMLALAAK HEGPAAPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31310.1 | 1e-44 | Trihelix family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG045330.2 |