PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG045330.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 331aa MW: 36276.4 Da PI: 5.9235

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG045330.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.3	4.8e-19	39	119	2	85
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 Wt e+++Liea+++++e+ + l ++W++v +++++ g++rs++qC+++w+nl ++ykk+++ e ++ + p + ++ TRIDC4AG045330.1 39 WTLPETMLLIEAKKRVHEERHPADLGLARWRWVEDYCWRAGCRRSQNQCNDRWDNLMRDYKKVRAYEHAGAGA---EAPSYWEM 119 *****************************************************************99987422...24555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MDTKGSGAHR EGEETGNTMA GNVGAGAMTV AREYRRGNWT LPETMLLIEA KKRVHEERHP 60 ADLGLARWRW VEDYCWRAGC RRSQNQCNDR WDNLMRDYKK VRAYEHAGAG AEAPSYWEMA 120 RAERKARYLP SNLLREIYEA MGEIVERRMS FAGAGGPFLG APPPPPMVSS GLVGVPMQAS 180 PLAQVQPRPL EDQEETRGSS ESSPERKRLR LSLDGQPGSS TPASAAGHDD RHQEPQGDDR 240 ESSDDTEEYD ELSGAIGQCA AILSGALESR EAAEERRHRE VMAVEERRSV AKQARREAGE 300 QCMAGLAAAV GQLAGSMLAL AAKHEGPAAP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31310.1	1e-44	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG045330.1