PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG044750.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 101aa    MW: 11612.3 Da    PI: 10.8201
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG044750.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF84.46.9e-27958150
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                      krien++nr+vtfskRrng++KKA+ELSvLCd+++a+++fs++ +l  +s
  TRIDC4AG044750.4  9 KRIENNTNRHVTFSKRRNGLIKKAYELSVLCDIDIALLMFSPSRRLCPFS 58
                      79*****************************************9998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 101 aa     Download sequence    
MGRVKLAIKR IENNTNRHVT FSKRRNGLIK KAYELSVLCD IDIALLMFSP SRRLCPFSGR  60
HGVEDVLLRY LNMSDNDRGE PIQNREVREA RTSSSSSSFK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.22e-37MIKC_MADS family protein