PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044020.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 773aa MW: 83627.5 Da PI: 7.0333

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044020.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.4	4.4e-16	462	500	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4AG044020.5 462 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 500 689**********************************96 PP
2	TCR	49.3	9.9e-16	547	586	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4AG044020.5 547 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 586 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 773 aa Download sequence
MQDSPLFSFI DSLSPIEPLK SAYSGNGLQA YHQSLNVTSV SSIFTSPHHN AHKESKLSKG 60 SFADYTENEL CMEEGTDKNK SPTSSTAVRL FACTSTITRE SHTMTTCSVN EGIVDPPKGP 120 NDLPQPGRFD SGSPDHNTAP CHGVSVRSDL KQDKCPKLEA VQTTNNTVEK RKCLFSTDMQ 180 LQDGCQPAKE NNEVMGCEWD DLVSVTSGEL LAFDSSMDQH HTGVQLAVNN AESCGYLLSK 240 LAGGADISDR THPTTSSQAY YHEMVVGEDK AENGQLFPED KKTILSEEIQ DNINEENACI 300 PLGCKVETQQ RGVRRRCLVF EAAGYSHRTV QKESAGDLSF STCKGKSSAQ NHRNPGKTPS 360 PHVFRGIGLH LNALALTSKD KMACQDPLAT ALVPSLKTEQ DVHGNLLSAG GNFFHSGSGS 420 LDLQMDNDDC SVGGFLGNDH NSSQSSSPPK KRRKSDNGDD DSCKRCSCKK SKCLKLYCEC 480 FAAGVYCSEP CSCQGCLNKP IHEEIVLSTR KQIEFRNPLA FAPKVIRMSE AGQETQEDPK 540 NTPASARHKR GCNCKKSSCL KKYCECYQGG VGCSNNCRCE TCKNTFGTRD VAVSAENEEM 600 KQEGEQTESC EKEKENDQQK ANVHSEDHKL VELVVPITPP LDVSSSLLKQ PNFSNAKPPR 660 PCKARSGSSS RSSKASVTVQ SRKISKVGDS VFIEEMPDIL REPSSPGIVK TCSPNGKRVS 720 PPHNALSISP NRKGGRKLIL KSIPSFPSLV GDTNGGSAIC SSDSTTALAL GPS

Sequence ? help Back to Top

Protein Sequence Length: 773 aa Download sequence

MQDSPLFSFI DSLSPIEPLK SAYSGNGLQA YHQSLNVTSV SSIFTSPHHN AHKESKLSKG  60
SFADYTENEL CMEEGTDKNK SPTSSTAVRL FACTSTITRE SHTMTTCSVN EGIVDPPKGP  120
NDLPQPGRFD SGSPDHNTAP CHGVSVRSDL KQDKCPKLEA VQTTNNTVEK RKCLFSTDMQ  180
LQDGCQPAKE NNEVMGCEWD DLVSVTSGEL LAFDSSMDQH HTGVQLAVNN AESCGYLLSK  240
LAGGADISDR THPTTSSQAY YHEMVVGEDK AENGQLFPED KKTILSEEIQ DNINEENACI  300
PLGCKVETQQ RGVRRRCLVF EAAGYSHRTV QKESAGDLSF STCKGKSSAQ NHRNPGKTPS  360
PHVFRGIGLH LNALALTSKD KMACQDPLAT ALVPSLKTEQ DVHGNLLSAG GNFFHSGSGS  420
LDLQMDNDDC SVGGFLGNDH NSSQSSSPPK KRRKSDNGDD DSCKRCSCKK SKCLKLYCEC  480
FAAGVYCSEP CSCQGCLNKP IHEEIVLSTR KQIEFRNPLA FAPKVIRMSE AGQETQEDPK  540
NTPASARHKR GCNCKKSSCL KKYCECYQGG VGCSNNCRCE TCKNTFGTRD VAVSAENEEM  600
KQEGEQTESC EKEKENDQQK ANVHSEDHKL VELVVPITPP LDVSSSLLKQ PNFSNAKPPR  660
PCKARSGSSS RSSKASVTVQ SRKISKVGDS VFIEEMPDIL REPSSPGIVK TCSPNGKRVS  720
PPHNALSISP NRKGGRKLIL KSIPSFPSLV GDTNGGSAIC SSDSTTALAL GPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	449	455	PKKRRKS
2	450	454	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-82	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044020.5