PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044020.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 797aa MW: 86409.8 Da PI: 7.2994

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044020.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.3	4.6e-16	486	524	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4AG044020.3 486 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 524 689**********************************96 PP
2	TCR	49.2	1e-15	571	610	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+gCnCkks+ClkkYCeC++ g+ Cs++C+Ce CkN+ TRIDC4AG044020.3 571 RHKRGCNCKKSSCLKKYCECYQGGVGCSNNCRCETCKNTF 610 589***********************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 797 aa Download sequence
LAVWSLLLKF MHTLRQPAGS DPFRFKDSPL FSFIDSLSPI EPLKSAYSGN GLQAYHQSLN 60 VTSVSSIFTS PHHNAHKESK LSKGSFADYT ENELCMEEGT DKNKSPTSST AVRLFACTST 120 ITRESHTMTT CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP 180 KLEAVQTTNN TVEKRKCLFS TDMQLQDGCQ PAKENNEVMG CEWDDLVSVT SGELLAFDSS 240 MDQHHTGVQL AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKAENGQL 300 FPEDKKTILS EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG 360 DLSFSTCKGK SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD PLATALVPSL 420 KTEQDVHGNL LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD 480 NGDDDSCKRC SCKKSKCLKL YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR 540 NPLAFAPKVI RMSEAGQETQ EDPKNTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSNN 600 CRCETCKNTF GTRDVAVSAE NEEMKQEGEQ TESCEKEKEN DQQKANVHSE DHKLVELVVP 660 ITPPLDVSSS LLKQPNFSNA KPPRPCKARS GSSSRSSKAS VTVQSRKISK VGDSVFIEEM 720 PDILREPSSP GIVKTCSPNG KRVSPPHNAL SISPNRKGGR KLILKSIPSF PSLVGDTNGG 780 SAICSSDSTT ALALGPS

Sequence ? help Back to Top

Protein Sequence Length: 797 aa Download sequence

LAVWSLLLKF MHTLRQPAGS DPFRFKDSPL FSFIDSLSPI EPLKSAYSGN GLQAYHQSLN  60
VTSVSSIFTS PHHNAHKESK LSKGSFADYT ENELCMEEGT DKNKSPTSST AVRLFACTST  120
ITRESHTMTT CSVNEGIVDP PKGPNDLPQP GRFDSGSPDH NTAPCHGVSV RSDLKQDKCP  180
KLEAVQTTNN TVEKRKCLFS TDMQLQDGCQ PAKENNEVMG CEWDDLVSVT SGELLAFDSS  240
MDQHHTGVQL AVNNAESCGY LLSKLAGGAD ISDRTHPTTS SQAYYHEMVV GEDKAENGQL  300
FPEDKKTILS EEIQDNINEE NACIPLGCKV ETQQRGVRRR CLVFEAAGYS HRTVQKESAG  360
DLSFSTCKGK SSAQNHRNPG KTPSPHVFRG IGLHLNALAL TSKDKMACQD PLATALVPSL  420
KTEQDVHGNL LSAGGNFFHS GSGSLDLQMD NDDCSVGGFL GNDHNSSQSS SPPKKRRKSD  480
NGDDDSCKRC SCKKSKCLKL YCECFAAGVY CSEPCSCQGC LNKPIHEEIV LSTRKQIEFR  540
NPLAFAPKVI RMSEAGQETQ EDPKNTPASA RHKRGCNCKK SSCLKKYCEC YQGGVGCSNN  600
CRCETCKNTF GTRDVAVSAE NEEMKQEGEQ TESCEKEKEN DQQKANVHSE DHKLVELVVP  660
ITPPLDVSSS LLKQPNFSNA KPPRPCKARS GSSSRSSKAS VTVQSRKISK VGDSVFIEEM  720
PDILREPSSP GIVKTCSPNG KRVSPPHNAL SISPNRKGGR KLILKSIPSF PSLVGDTNGG  780
SAICSSDSTT ALALGPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	473	479	PKKRRKS
2	474	478	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-82	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044020.3