PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG044020.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 568aa MW: 61829.9 Da PI: 6.2553

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044020.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.9	3e-16	469	507	2	40
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+C+CkkskClk+YCeCfaag++Cse C+C++C Nk TRIDC4AG044020.2 469 SCKRCSCKKSKCLKLYCECFAAGVYCSEPCSCQGCLNKP 507 689**********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
AGSDPFRFKD SPLFSFIDSL SPIEPLKSAY SGNGLQAYHQ SLNVTSVSSI FTSPHHNAHK 60 ESKLSKGSFA DYTENELCME EGTDKNKSPT SSTAVRLFAC TSTITRESHT MTTCSVNEGI 120 VDPPKGPNDL PQPGRFDSGS PDHNTAPCHG VSVRSDLKQD KCPKLEAVQT TNNTVEKRKC 180 LFSTDMQLQD GCQPAKENNE VMGCEWDDLV SVTSGELLAF DSSMDQHHTG VQLAVNNAES 240 CGYLLSKLAG GADISDRTHP TTSSQAYYHE MVVGEDKAEN GQLFPEDKKT ILSEEIQDNI 300 NEENACIPLG CKVETQQRGV RRRCLVFEAA GYSHRTVQKE SAGDLSFSTC KGKSSAQNHR 360 NPGKTPSPHV FRGIGLHLNA LALTSKDKMA CQDPLATALV PSLKTEQDVH GNLLSAGGNF 420 FHSGSGSLDL QMDNDDCSVG GFLGNDHNSS QSSSPPKKRR KSDNGDDDSC KRCSCKKSKC 480 LKLYCECFAA GVYCSEPCSC QGCLNKPIHE EIVLSTRKQI EFRNPLAFAP KVIRMSEAGQ 540 ETQVGNFINK FISTSVAHYT LLYDAETM

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

AGSDPFRFKD SPLFSFIDSL SPIEPLKSAY SGNGLQAYHQ SLNVTSVSSI FTSPHHNAHK  60
ESKLSKGSFA DYTENELCME EGTDKNKSPT SSTAVRLFAC TSTITRESHT MTTCSVNEGI  120
VDPPKGPNDL PQPGRFDSGS PDHNTAPCHG VSVRSDLKQD KCPKLEAVQT TNNTVEKRKC  180
LFSTDMQLQD GCQPAKENNE VMGCEWDDLV SVTSGELLAF DSSMDQHHTG VQLAVNNAES  240
CGYLLSKLAG GADISDRTHP TTSSQAYYHE MVVGEDKAEN GQLFPEDKKT ILSEEIQDNI  300
NEENACIPLG CKVETQQRGV RRRCLVFEAA GYSHRTVQKE SAGDLSFSTC KGKSSAQNHR  360
NPGKTPSPHV FRGIGLHLNA LALTSKDKMA CQDPLATALV PSLKTEQDVH GNLLSAGGNF  420
FHSGSGSLDL QMDNDDCSVG GFLGNDHNSS QSSSPPKKRR KSDNGDDDSC KRCSCKKSKC  480
LKLYCECFAA GVYCSEPCSC QGCLNKPIHE EIVLSTRKQI EFRNPLAFAP KVIRMSEAGQ  540
ETQVGNFINK FISTSVAHYT LLYDAETM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	456	462	PKKRRKS
2	457	461	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	5e-33	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044020.2