PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG042060.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 378aa    MW: 41854 Da    PI: 5.8679
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG042060.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57383.72.6e-2686180297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                       +fqr+wse+De+ +LqGl+ +   +g     d++ fy+ +++s+   +++sql+eK+rrLK+K ++ ++++++g +p+  ++hd+++++l+++
  TRIDC4AG042060.2  86 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVSSRVARGLDPARLAPHDRDVLHLCSR 177
                       79*******************.556878888************************************************************** PP

            DUF573  95 iWg 97 
                       +W+
  TRIDC4AG042060.2 178 LWD 180
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXG QNPPFKFQRI WSESDELRFL QGLLGCGAQG LVFPRDLNVF  120
YDRFSESMPQ PYTRSQLSEK LRRLKNKHRN VSSRVARGLD PARLAPHDRD VLHLCSRLWD  180
PANAATSPFA AAAAPAGSSG NKRRRSNPAV VPLDVPAPSG DSNSHGYNGI SSSAPGAAFP  240
DDNGAEDVMY LEQESGHHLY FDEGAAFVAD GNLDGITLDG IALDQAETMA NAMNNGGTGQ  300
NGNCNVLLPR SSEHRMASAV LDVFEECLRE AKADGIVNGG NAQESELARR WRAQRIDELD  360
VLSRRLRLII EDATAAGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.23e-12GeBP family protein