PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG042060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GeBP
Protein Properties Length: 291aa    MW: 32530.7 Da    PI: 7.1446
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG042060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57384.41.6e-2687181297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                       +fqr+wse+De+ +LqGl+ +   +g     d++ fy+ +++s+   +++sql+eK+rrLK+K ++ ++++++g +p+  ++hd+++++l+++
  TRIDC4AG042060.1  87 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVSSRVARGLDPARLAPHDRDVLHLCSR 178
                       79*******************.556878888************************************************************** PP

            DUF573  95 iWg 97 
                       +W+
  TRIDC4AG042060.1 179 LWD 181
                       **8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX GQNPPFKFQR IWSESDELRF LQGLLGCGAQ GLVFPRDLNV  120
FYDRFSESMP QPYTRSQLSE KLRRLKNKHR NVSSRVARGL DPARLAPHDR DVLHLCSRLW  180
DPANAATSPF AAAAAPAGSS GNKRRRSNPA VVPLDVPAPS GDSNSHGYNG ISSSAPGAAF  240
PDDNGAEDVM YLEQESGHHL YFDEGAAFVA DGNLDGLPKM LSTMEVIPKM L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.22e-12GeBP family protein